Publications | Finkel Lab | The Hebrew University of Jerusalem

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The Finkel Lab

Publications

Dmitry Alekhin, Moshe Alon, Tomer Sidi, Stav Perez, Gon Carmi, Omri M Finkel, Amir Erez (2025)
Fast and accurate taxonomic domain assignment of short metagenomic reads using BBERT
bioRxiv

Amal Ghosheh, Moshe Alon, Shay Kenneth-Mordoch, Ziv Kleinman, Marnix H Medema, Omri M Finkel (2025)
Diverse rhizospheric Bacillus are required for protection against a leaf pathogen
The ISME Journal

Francisco Dini-Andreote, Darren M Wells, Jonathan A Atkinson, Brian S Atkinson, Omri M Finkel, Gabriel Castrillo (2025)
Microbial drivers of root plasticity
New Phytologist

Moshe Alon, Yoni Waitz, Omri M Finkel, Efrat Sheffer (2024)
The native distribution of a common legume shrub is limited by the range of its nitrogen‐fixing mutualist
New Phytologist

Keming Yang, Ruixin Fu, Haichao Feng, Gaofei Jiang, Omri Finkel, Tianyu Sun, Mingchun Liu, Baowen Huang, Shan Li, Xiaofang Wang, Tianjie Yang, Yikui Wang, Shimei Wang, Yangchun Xu, Qirong Shen, Ville-Petri Friman, Alexandre Jousset, Zhong Wei (2023)
RIN enhances plant disease resistance via root exudate-mediated assembly of disease-suppressive rhizosphere microbiota
Molecular Plant

Iakovos S Pantelides, Ioannis A Stringlis, Omri M Finkel, Jesús Mercado-Blanco (2023)
Organic amendments: microbial communities and their role in plant fitness and disease suppression
Frontiers in Plant Science

Corinne Best, Ron Mizrahi, Rana Edris, Hui Tang, Hagit Zer, Catherine Colas des Francs‐Small, Omri M Finkel, Hongliang Zhu, Ian D Small, Oren Ostersetzer‐Biran
(2023)
MSP1 encodes an essential RNA‐binding pentatricopeptide repeat factor required for nad1 maturation and complex I biogenesis in Arabidopsis mitochondria
New Phytologist

Jonathan M Conway, William G Walton, Isai Salas-González, Theresa F Law, Chloe A Lindberg, Laura E Crook, Suzanne M Kosina, Connor R Fitzpatrick, Adam D Lietzan, Trent R Northen, Corbin D Jones, Omri M Finkel, Matthew R Redinbo, Jeffery L Dangl
(2022)
Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome
Nature microbiology

Fernanda Salvato, Simina Vintila, Omri M Finkel, Jeffery L Dangl, Manuel Kleiner
(2022)
Evaluation of protein extraction methods for metaproteomic analyses of root-associated microbes
Molecular Plant-Microbe Interactions

Mingsheng Qi, Jeffrey C Berry, Kira W Veley, Lily O’Connor, Omri M Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina del Rio, Cody Creech, Peng Liu, Susannah G Tringe, Jeffery L Dangl, Daniel P Schachtman, Rebecca S Bart
(2022)
Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
The ISME Journal

Paulo JPL Teixeira, Nicholas R Colaianni, Theresa F Law, Jonathan M Conway, Sarah Gilbert, Haofan Li, Isai Salas-González, Darshana Panda, Nicole M Del Risco, Omri M Finkel, Gabriel Castrillo, Piotr Mieczkowski, Corbin D Jones, Jeffery L Dangl
(2021)
Specific modulation of the root immune system by a community of commensal bacteria
Proceedings of the National Academy of Sciences

Omri M Finkel, Isai Salas-González, Gabriel Castrillo, Jonathan M Conway, Theresa F Law, Paulo José Pereira Lima Teixeira, Ellie D Wilson, Connor R Fitzpatrick, Corbin D Jones, Jeffery L Dangl
(2020)
A single bacterial genus maintains root growth in a complex microbiome
Nature

Connor R Fitzpatrick, Isai Salas-González, Jonathan M Conway, Omri M Finkel, Sarah Gilbert, Dor Russ, Paulo José Pereira Lima Teixeira, Jeffery L Dangl (2020)
The plant microbiome: from ecology to reductionism and beyond
Annual review of microbiology

Dario X Ramirez-Villacis, Omri M Finkel, Isai Salas-González, Connor R Fitzpatrick, Jeffery L Dangl, Corbin D Jones, Antonio Leon-Reyes
(2020)
Root microbiome modulates plant growth promotion induced by low doses of glyphosate
MSphere

Omri M Finkel, Isai Salas-González, Gabriel Castrillo, Stijn Spaepen, Theresa F Law, Paulo José Pereira Lima Teixeira, Corbin D Jones, Jeffery L Dangl
(2019)
The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate starvation response
PLoS Biology

Erinn M O’Neill, Tatiana S Mucyn, Jon B Patteson, Omri M Finkel, Eui-Hwan Chung, Joshua A Baccile, Elisabetta Massolo, Frank C Schroeder, Jeffery L Dangl, Bo Li

(2018)
Phevamine A, a small molecule that suppresses plant immune responses

Proceedings of the National Academy of Sciences

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